pyGenClean package ================== Subpackages ----------- .. toctree:: pyGenClean.Contamination pyGenClean.DupSNPs pyGenClean.DupSamples pyGenClean.Ethnicity pyGenClean.FlagHW pyGenClean.FlagMAF pyGenClean.HeteroHap pyGenClean.LaTeX pyGenClean.MarkerMissingness pyGenClean.Misc pyGenClean.NoCallHetero pyGenClean.PlateBias pyGenClean.PlinkUtils pyGenClean.RelatedSamples pyGenClean.SampleMissingness pyGenClean.SexCheck Submodules ---------- pyGenClean.pipeline_error module -------------------------------- .. automodule:: pyGenClean.pipeline_error :members: :undoc-members: :show-inheritance: pyGenClean.run_data_clean_up module ----------------------------------- .. automodule:: pyGenClean.run_data_clean_up :members: :undoc-members: :show-inheritance: pyGenClean.version module ------------------------- .. automodule:: pyGenClean.version :members: :undoc-members: :show-inheritance: Module contents --------------- .. automodule:: pyGenClean :members: :undoc-members: :show-inheritance: